A proposal to change the name of the NBPF/DUF1220 domain to the Olduvai domain
نویسندگان
چکیده
We are jointly proposing a new name for a protein domain of approximately 65 amino acids that has been previously termed NBPF or DUF1220. Our two labs independently reported the initial studies of this domain, which is encoded almost entirely within a single gene family. The name Neuroblastoma Breakpoint Family ( NBPF) was applied to this gene family when the first identified member of the family was found to be interrupted in an individual with neuroblastoma. Prior to this discovery, the PFAM database had termed the domain DUF1220, denoting it as one of many protein domains of unknown function. It has been PFAM's intention to use "DUF" nomenclature to serve only as a temporary placeholder until more appropriate names are proposed based on research findings. We believe that additional studies of this domain, primarily from our laboratories over the past 10 years, have resulted in furthering our understanding of these sequences to the point where proposing a new name for this domain is warranted. Because of considerable data linking the domain to human-specific evolution, brain expansion and cognition, we believe a name reflecting these findings would be appropriate. With this in mind, we have chosen to name the domain (and the repeat that encodes it) Olduvai. The gene family will remain as NBPF for now. The primary domain subtypes will retain their previously assigned names (e.g. CON1-3; HLS1-3), and the three-domain block that expanded dramatically in the human lineage will be termed the Olduvai triplet. The new name refers to Olduvai Gorge, which is a site in East Africa that has been the source of major anthropological discoveries in the early-mid 1900's. We also chose the name as a tribute to the scientists who made important contributions to the early studies of human origins and our African genesis.
منابع مشابه
Evolutionary History and Genome Organization of DUF1220 Protein Domains
DUF1220 protein domains exhibit the most extreme human lineage-specific (HLS) copy number increase of any protein coding region in the human genome and have recently been linked to evolutionary and pathological changes in brain size (e.g., 1q21-associated microcephaly). These findings lend support to the view that DUF1220 domain dosage is a key factor in the determination of primate (and human)...
متن کاملImage encryption based on chaotic tent map in time and frequency domains
The present paper is aimed at introducing a new algorithm for image encryption using chaotic tent maps and the desired key image. This algorithm consists of two parts, the first of which works in the frequency domain and the second, in the time domain. In the frequency domain, a desired key image is used, and a random number is generated, using the chaotic tent map, in order to change the phase...
متن کاملCompressed Domain Scene Change Detection Based on Transform Units Distribution in High Efficiency Video Coding Standard
Scene change detection plays an important role in a number of video applications, including video indexing, searching, browsing, semantic features extraction, and, in general, pre-processing and post-processing operations. Several scene change detection methods have been proposed in different coding standards. Most of them use fixed thresholds for the similarity metrics to determine if there wa...
متن کاملA Novel Technique for Steganography Method Based on Improved Genetic Algorithm Optimization in Spatial Domain
This paper devotes itself to the study of secret message delivery using cover image and introduces a novel steganographic technique based on genetic algorithm to find a near-optimum structure for the pair-wise least-significant-bit (LSB) matching scheme. A survey of the related literatures shows that the LSB matching method developed by Mielikainen, employs a binary function to reduce the numbe...
متن کاملطرح ادغام سرشاخه خوشه طب سنتی ایران در ساختار ابَراصطلاحنامه « نظام زبان واحد پزشکی (UMLS)»
Background & Aim: Unified Medical Language System (UMLS) is an extensive ontology of biomedical knowledge developed and maintained by U.S. National Library of Medicine (NLM). Traditional Iranian Medicine (TIM) does not have any position in the structure of metathesaurus of UMLS. The main aim of this study was designing a scheme of TIM cluster's crotch mapping in the structure of metathesaurus o...
متن کامل